A (1.4 + ∈)-Approximation algorithm for the 2-max-duo problem

Yao Xu, Yong Chen, Guohui Lin, Tian Liu, Taibo Luo, Peng Zhang

Research output: Contribution to book or proceedingConference articlepeer-review

4 Scopus citations

Abstract

The maximum duo-preservation string mapping (Max-Duo) problem is the complement of the well studied minimum common string partition (MCSP) problem, both of which have applications in many fields including text compression and bioinformatics. k-Max-Duo is the restricted version of Max-Duo, where every letter of the alphabet occurs at most k times in each of the strings, which is readily reduced into the well known maximum independent set (MIS) problem on a graph of maximum degree ? ≤ 6(k - 1). In particular, 2-Max-Duo can then be approximated arbitrarily close to 1.8 using the state-of-The-Art approximation algorithm for the MIS problem. 2-Max-Duo was proved APX-hard and very recently a (1.6 + ∈)-Approximation was claimed, for any > 0. In this paper, we present a vertex-degree reduction technique, based on which, we show that 2-Max-Duo can be approximated arbitrarily close to 1.4.

Original languageEnglish
Title of host publication28th International Symposium on Algorithms and Computation, ISAAC 2017
EditorsTakeshi Tokuyama, Yoshio Okamoto
PublisherSchloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing
ISBN (Electronic)9783959770545
DOIs
StatePublished - Dec 1 2017
Event28th International Symposium on Algorithms and Computation, ISAAC 2017 - Phuket, Thailand
Duration: Dec 9 2017Dec 22 2017

Publication series

NameLeibniz International Proceedings in Informatics, LIPIcs
Volume92
ISSN (Print)1868-8969

Conference

Conference28th International Symposium on Algorithms and Computation, ISAAC 2017
Country/TerritoryThailand
CityPhuket
Period12/9/1712/22/17

Keywords

  • Approximation algorithm
  • Duo-preservation string mapping
  • Independent set
  • String partition

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