Crystal structures of zinc(II) coordination complexes with isoquinoline N-oxide

Erin N. Groneck, Nathan Peek, Will E. Lynch, Clifford W. Padgett

Research output: Contribution to journalArticlepeer-review

Abstract

The reaction of one equivalent of zinc(II) halide salts with two equivalents of isoquinoline N-oxide (iQNO; C9H7NO) in methanol yields compounds of the general formula [ZnX2(iQNO)2], with X = Cl- (I), Br- (II) and I- (III). However, starting with zinc(II) perchlorate or nitrate leads to the formation of complex ions with the compositions [Zn(iQNO)6](X)2 for X = ClO4- (IV), and [Zn(iQNO)(H2O)5](iQNO)2X2 for X = NO3- (V). Complexes (I), (II) and (III), namely dichloridobis(isoquinoline N-oxide-κO)zinc(II) [ZnCl2(C9H7NO)2], dibromidobis(isoquinoline N-oxide-κO)zinc(II) [ZnBr2(C9H7NO)2], and diiodidobis(isoquinoline N-oxide-κO)zinc(II) [ZnI2(C9H7NO)2], each exhibit a distorted tetrahedral coordination geometry around the zinc(II) ion coordinated by two iQNO ligands bound through the oxygen atom and two halide ions. The zinc ion lies on a crystallographic twofold axis in the bromo complex. The X - Zn - X bond angles are approximately 15-17° larger than the O - Zn - O bond angles resulting in the observed tetrahedral distortion. In complex (IV), hexakis(isoquinoline N-oxide-κO)zinc(II) bis(perchlorate), [Zn(C9H7NO)6](ClO4)2, the zinc(II) ion occupies a special position with 3 site symmetry and is octahedrally coordinated by six iQNO ligands, albeit with slight distortions evidenced by a spread of cis bond angles from 85.82 (4) to 94.18 (4)°. The chlorine atom of the perchlorate anion lies on a crystallographic threefold axis. Finally, complex (V) crystallizes with a pseudo-octahedral geometry; pentaaqua(isoquinoline N-oxide-κO)zinc(II) dinitrate-isoquinoline N-oxide (1/2), [Zn(C9H7NO)(H2O)5](NO3)2·2(C9H7NO). The nitrate ions and non-coordinated iQNO molecules engage in π-stacking and hydrogen-bonding interactions with the coordinated water molecules. The iQNO - Zn - O equatorial bond angles range from 88.98 (9) to 94.90 (9)°, with the largest deviation from a perfect octahedral angle attributed to the influence of a weak C - H⋯O (from water) interaction (2.287 Å) involving the bound iQNO ligand.

Original languageEnglish
Pages (from-to)132-139
Number of pages8
JournalActa Crystallographica Section E: Crystallographic Communications
Volume81
Issue numberPt 2
DOIs
StatePublished - Feb 1 2025
Externally publishedYes

Scopus Subject Areas

  • General Chemistry
  • General Materials Science
  • Condensed Matter Physics

Keywords

  • crystal structure
  • Hirshfeld surface analysis
  • isoquinoline N-oxide
  • zinc(II) coordination complex

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