IMAS: The interactive multigenomic analysis system

Christopher D. Shaw, Gregory A. Dasch, Marina E. Eremeeva

Research output: Contribution to book or proceedingConference articlepeer-review

5 Scopus citations

Abstract

This paper introduces a new Visual Analysis tool named IMAS (Interactive Multigenomic Analysis System), which combines common analysis tools such as Glimmer, BLAST, and Clustal-W into a unified Visual Analytic framework. IMAS displays the primary DNA sequence being analyzed by the biologist in a highly interactive, zoomable visual display. The user may analyze the sequence in a number of ways, and visualize these analyses in a coherent, sequence aligned form, with all related analysis products grouped together. This enables the user to rapidly perform analyses of DNA sequences without the need for tedious and error-prone cutting and pasting of sequence data from text files to and from web-based databases and data analysis services, as is now common practice.

Original languageEnglish
Title of host publicationVAST IEEE Symposium on Visual Analytics Science and Technology 2007, Proceedings
Pages59-66
Number of pages8
DOIs
StatePublished - 2007
EventVAST IEEE Symposium on Visual Analytics Science and Technology 2007 - Sacramento, CA, United States
Duration: Oct 30 2007Nov 1 2007

Publication series

NameVAST IEEE Symposium on Visual Analytics Science and Technology 2007, Proceedings

Conference

ConferenceVAST IEEE Symposium on Visual Analytics Science and Technology 2007
Country/TerritoryUnited States
CitySacramento, CA
Period10/30/0711/1/07

Keywords

  • Bioinformatics
  • Visual analytics

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