TY - JOUR
T1 - Split sizes and extremal tree shapes
AU - Wang, Hua
N1 - Publisher Copyright:
© 2018 Elsevier Inc.
PY - 2019/3
Y1 - 2019/3
N2 - The size ‖σ‖ of a split σ (a bipartition) of the leaf set of a tree is the cardinality of the smaller part. There exist many studies of properties of the phylogenetic tree shapes (trees with no vertex of degree 2) and general trees related to the split sizes. A general function Φf(T)=∑σ∈Σ⁎(T)f(‖σ‖) was proposed for an (strictly) increasing function f, where the sum is over all non-trivial splits induced by internal edges. There are many interesting applications of this important concept. In particular, Φf(⋅) was used to measure the balance of phylogenetic tree shapes. Extremal problems for Φf(⋅) have been considered and partially answered for binary trees. In this paper, we study the extremal trees with a given degree sequence that maximize or minimize Φf(⋅). These results can also be directly applied to phylogenetic tree shapes and their degree sequences. When the number of leaves is fixed, we can also compare the extremal trees of different degree sequences. This comparison is conducted for degree sequences of phylogenetic tree shapes with given number of leaves. Immediate consequences are shown. Related problems are also proposed for potential future work.
AB - The size ‖σ‖ of a split σ (a bipartition) of the leaf set of a tree is the cardinality of the smaller part. There exist many studies of properties of the phylogenetic tree shapes (trees with no vertex of degree 2) and general trees related to the split sizes. A general function Φf(T)=∑σ∈Σ⁎(T)f(‖σ‖) was proposed for an (strictly) increasing function f, where the sum is over all non-trivial splits induced by internal edges. There are many interesting applications of this important concept. In particular, Φf(⋅) was used to measure the balance of phylogenetic tree shapes. Extremal problems for Φf(⋅) have been considered and partially answered for binary trees. In this paper, we study the extremal trees with a given degree sequence that maximize or minimize Φf(⋅). These results can also be directly applied to phylogenetic tree shapes and their degree sequences. When the number of leaves is fixed, we can also compare the extremal trees of different degree sequences. This comparison is conducted for degree sequences of phylogenetic tree shapes with given number of leaves. Immediate consequences are shown. Related problems are also proposed for potential future work.
UR - http://www.scopus.com/inward/record.url?scp=85058667979&partnerID=8YFLogxK
U2 - 10.1016/j.aam.2018.12.004
DO - 10.1016/j.aam.2018.12.004
M3 - Article
AN - SCOPUS:85058667979
SN - 0196-8858
VL - 104
SP - 135
EP - 164
JO - Advances in Applied Mathematics
JF - Advances in Applied Mathematics
ER -